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Results for submission Solution structure of the adhesion protein Bd37 from Babesia divergens.

BMRB ID: 15158

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Graph for Solution structure of the adhesion protein Bd37 from Babesia divergens

Lowest energy structure: S_08558

RMSD against lowest energy structure for all residues

StructureScore
S_08558.pdb12.7348
S_01158.pdb15.8464
S_09202.pdb16.6725
S_04536.pdb15.0037
S_01830.pdb15.6614
S_00215.pdb16.6017
S_09561.pdb18.9357
S_08187.pdb16.3502
S_04226.pdb18.8616
S_00546.pdb18.4736
Averaged Ca-rmsd16.514 +/- 1.915

RMSD against lowest energy structure for residues 159-179

StructureScore
S_08558.pdb3.1031
S_01158.pdb2.9817
S_09202.pdb3.0486
S_04536.pdb3.1164
S_01830.pdb2.8976
S_00215.pdb2.8795
S_09561.pdb3.1442
S_08187.pdb2.8548
S_04226.pdb3.1370
S_00546.pdb2.8655
Averaged Ca-rmsd3.003 +/- 0.120

This entry was calculated with Rosetta version 3.5 and version 3.2 of the CS-Rosetta Toolbox.

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Citation information:

"Determination of solution structures of proteins up to 40 kDa using CS-Rosetta with sparse NMR data from deuterated samples" Oliver F. Lange; Paolo Rossi; Nikolaos G. Sgourakis; Yifan Song; Hsiau-Wei Lee; James M. Aramini; Asli Ertekin; Rong Xiao; Thomas B. Acton; Gaetano T. Montelione; David Baker; Proceedings of the National Academy of Sciences 109(27) 10873-10878 (2012) doi: 10.1073/pnas.1203013109

"De novo structure generation using chemical shifts for proteins with high-sequence identity but different folds," Yang Shen; Philip N. Bryan; Yanan He; John Orban; David Baker; Ad Bax; Protein Science 19, 349-356 (2010) doi: 10.1002/pro.303

"De novo protein structure generation from incomplete chemical shift assignments," Yang Shen; Robert Vernon; David Baker; Ad Bax; J. Biomol. NMR 43, 63-78 (2009) doi: 10.1007/s10858-008-9288-5

"Consistent blind protein structure generation from NMR chemical shift data," Yang Shen; Oliver Lange; Frank Delaglio; Paolo Rossi; James M. Aramini; Gaohua Liu; Alexander Eletsky; Yibing Wu; Kiran K. Singarapu; Alexander Lemak; Alexandr Ignatchenko; Cheryl H. Arrowsmith; Thomas Szyperski; Gaetano T. Montelione; David Baker; Ad Bax; Proceedings of the National Academy of Sciences 105(12) 4685-4690 (2008) doi: 10.1073/pnas.0800256105