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A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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CS-Rosetta Results Access

Results for submission Solution structure of the RING domain from human TRAF6..

BMRB ID: 15014

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Graph for Solution structure of the RING domain from human TRAF6.

Lowest energy structure: S_0027_76_0001

RMSD against lowest energy structure for all residues

StructureScore
S_0027_76_0001.pdb5.1322
S_0017_282_0001.pdb4.4939
S_0017_227_0001.pdb5.4688
S_0023_285_0001.pdb4.3696
S_0001_265_0001.pdb3.6971
S_0020_7_0001.pdb7.2848
S_0003_31_0001.pdb3.5997
S_0030_157_0001.pdb3.0000
S_0003_272_0001.pdb4.3325
S_0011_148_0001.pdb4.1443
Averaged Ca-rmsd4.552 +/- 1.199

RMSD against lowest energy structure for residues 1-35

StructureScore
S_0027_76_0001.pdb3.2784
S_0017_282_0001.pdb2.8547
S_0017_227_0001.pdb5.2785
S_0023_285_0001.pdb1.2879
S_0001_265_0001.pdb1.7643
S_0020_7_0001.pdb2.0384
S_0003_31_0001.pdb1.4262
S_0030_157_0001.pdb1.4744
S_0003_272_0001.pdb1.3237
S_0011_148_0001.pdb1.5090
Averaged Ca-rmsd2.224 +/- 1.268

This entry was calculated with Rosetta version 3.5 and version 3.2 of the CS-Rosetta Toolbox.

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Citation information:

"Determination of solution structures of proteins up to 40 kDa using CS-Rosetta with sparse NMR data from deuterated samples" Oliver F. Lange; Paolo Rossi; Nikolaos G. Sgourakis; Yifan Song; Hsiau-Wei Lee; James M. Aramini; Asli Ertekin; Rong Xiao; Thomas B. Acton; Gaetano T. Montelione; David Baker; Proceedings of the National Academy of Sciences 109(27) 10873-10878 (2012) doi: 10.1073/pnas.1203013109

"De novo structure generation using chemical shifts for proteins with high-sequence identity but different folds," Yang Shen; Philip N. Bryan; Yanan He; John Orban; David Baker; Ad Bax; Protein Science 19, 349-356 (2010) doi: 10.1002/pro.303

"De novo protein structure generation from incomplete chemical shift assignments," Yang Shen; Robert Vernon; David Baker; Ad Bax; J. Biomol. NMR 43, 63-78 (2009) doi: 10.1007/s10858-008-9288-5

"Consistent blind protein structure generation from NMR chemical shift data," Yang Shen; Oliver Lange; Frank Delaglio; Paolo Rossi; James M. Aramini; Gaohua Liu; Alexander Eletsky; Yibing Wu; Kiran K. Singarapu; Alexander Lemak; Alexandr Ignatchenko; Cheryl H. Arrowsmith; Thomas Szyperski; Gaetano T. Montelione; David Baker; Ad Bax; Proceedings of the National Academy of Sciences 105(12) 4685-4690 (2008) doi: 10.1073/pnas.0800256105